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prn_t.h File Reference

(* $Id: prn_t.h 1919 2014-04-22 22:02:01Z johnoel $)

#include <string.h>
#include <stdlib.h>
#include <stdio.h>
#include <fstream.h>

Go to the source code of this file.

Classes

class  prnstream

Functions

prnstreamendl (prnstream &)

Function Documentation

Referenced by ad_comm::ad_comm(), ad_dstar::ad_dstar(), ad_read_pass1(), ad_read_pass1_der_values(), ad_read_pass1_eq(), ad_read_pass1_initialize(), ad_read_pass1_minus_eq(), ad_read_pass1_plus_eq(), ad_read_pass1x(), ad_read_pass2(), ad_read_pass2_dvdv(), ad_read_pass2_dvdvdv(), ad_read_pass2_minus(), ad_read_pass2_minuscv(), ad_read_pass2_minusvc(), ad_read_pass2_prod(), ad_read_pass2_prod_vector(), ad_read_pass2_prodc1(), ad_read_pass2_prodc2(), ad_read_pass2_sum(), ad_read_pass2_sumc(), ad_read_write_tilde_values(), function_minimizer::adamoeba(), stddev_params::add_to_gui_list(), adlist_ptr::add_to_list(), initial_params::add_to_list(), initial_df1b2params::add_to_list(), stddev_params::add_to_list(), adlist_ptr::adlist_ptr(), ADMB_getcallindex(), adnewhandler(), adpool::adpool(), dfpool::alloc(), adpool::alloc(), factor::allocate(), param_init_bounded_number_matrix::allocate(), adstring::allocate(), df3_one_vector::allocate(), df1_one_vector::allocate(), df1_two_vector::allocate(), imatrix::allocate(), df1_three_vector::allocate(), funnel_init_df1b2variable::allocate(), dvector::allocate(), df3_three_vector::allocate(), df3_two_vector::allocate(), adstring_array::allocate(), init_df1b2vector::allocate(), test_smartlist::allocate(), fixed_smartlist::allocate(), fixed_smartlist2::allocate(), param_init_vector::allocate(), param_init_bounded_vector::allocate(), param_init_number::allocate(), param_init_bounded_number::allocate(), param_init_matrix::allocate(), df1b2_init_number_vector::allocate(), df1b2_init_bounded_number_vector::allocate(), quadratic_prior::allocate(), dvar_vector::allocate(), dvar_matrix::allocate(), param_init_vector_vector::allocate(), param_init_bounded_vector_vector::allocate(), param_init_matrix_vector::allocate(), dmatrix::allocate(), param_init_bounded_matrix_vector::allocate(), param_init_number_vector::allocate(), param_init_bounded_number_vector::allocate(), d3_array::allocate(), i3_array::allocate(), dvar3_array::allocate(), d4_array::allocate(), dvar4_array::allocate(), d5_array::allocate(), dvar5_array::allocate(), d6_array::allocate(), dvar6_array::allocate(), d7_array::allocate(), dvar7_array::allocate(), lmatrix::allocate(), ad_comm::allocate(), funnel_init_var::allocate_all(), laplace_approximation_calculator::allocate_block_diagonal_stuff(), allocate_dvariable_space(), dvector::allocatec(), dvar_vector::allocatec(), adstring_array::append_distinct(), arr_new(), laplace_approximation_calculator::banded_calculations(), laplace_approximation_calculator::banded_calculations_lme(), laplace_approximation_calculator::banded_calculations_trust_region_approach(), banded_symmetric_dmatrix::banded_symmetric_dmatrix(), banner(), betacf(), betai(), laplace_approximation_calculator::block_diagonal_calculations(), laplace_approximation_calculator::build_up_nested_shape(), calculate_importance_sample(), calculate_importance_sample_block_diagonal(), calculate_importance_sample_block_diagonal_funnel(), calculate_importance_sample_block_diagonal_option2(), calculate_importance_sample_block_diagonal_option_antithetical(), calculate_importance_sample_funnel(), calculate_importance_sample_shess(), calculate_laplace_approximation(), ad_comm::change_datafile_name(), ad_comm::change_pinfile_name(), test_smartlist::check_buffer_size(), fixed_smartlist::check_buffer_size(), fixed_smartlist2::check_buffer_size(), check_choleski_decomp(), check_datafile_pointer(), laplace_approximation_calculator::check_derivatives(), laplace_approximation_calculator::check_hessian_type(), laplace_approximation_calculator::check_hessian_type2(), dlist::check_list(), check_pool_depths(), laplace_approximation_calculator::check_pool_size(), check_shape(), laplace_approximation_calculator::check_sparse_matrix_structure(), checkidentiferstring(), choleski_decomp(), choleski_decomp_error(), choleski_decomp_neghess_error(), choleski_decomp_positive(), choleski_decomp_trust_bound(), dfpool::clean(), adpool::clean(), colsum(), column(), function_minimizer::computations1(), initial_params::correct_for_dev_objects(), dlist::create(), cs_add(), cumd_gamma(), d3_array::d3_array(), df1b2variable::deallocate(), dmatrix::deallocate(), d3_array::deallocate(), dvar3_array::deallocate(), d4_array::deallocate(), dvar4_array::deallocate(), d5_array::deallocate(), dvar5_array::deallocate(), d6_array::deallocate(), dvar6_array::deallocate(), d7_array::deallocate(), dvar7_array::deallocate(), laplace_approximation_calculator::default_calculations(), laplace_approximation_calculator::default_calculations_check_derivatives(), funnel_init_var::delete_from_list(), density_negbinomial(), function_minimizer::dep_hess_routine(), function_minimizer::depvars_routine(), derch(), det(), df1_one_matrix::df1_one_matrix(), df1_three_matrix::df1_three_matrix(), df1_two_matrix::df1_two_matrix(), df1b2_gradcalc1(), df1b2_header_ptr_vector::df1b2_header_ptr_vector(), df1b2variable::df1b2variable(), df1b2vector::df1b2vector(), df3_one_matrix::df3_one_matrix(), df3_three_matrix::df3_three_matrix(), df3_two_matrix::df3_two_matrix(), df_check_derivative_values(), df_check_derivative_values_indexed(), df_check_derivative_values_indexed_break(), DF_dvlog(), DF_FILE::DF_FILE(), df_ln_det_choleski(), df_print_identifier_string(), dfboundp(), dfcholeski_decomp(), dfcholeski_decomp_banded(), dfcholeski_decomp_positive(), dfcholeski_sparse(), diagonal(), dlist::dlist(), dmatrix::dmatrix(), do_gauss_hermite_block_diagonal(), do_gauss_hermite_block_diagonal_multi(), laplace_approximation_calculator::do_newton_raphson_banded(), laplace_approximation_calculator::do_newton_raphson_state_space(), laplace_approximation_calculator::do_one_feval(), laplace_approximation_calculator::do_separable_stuff(), laplace_approximation_calculator::do_separable_stuff_hessian_type_information(), laplace_approximation_calculator::do_separable_stuff_laplace_approximation_banded_adjoint(), laplace_approximation_calculator::do_separable_stuff_newton_raphson_banded(), dot(), double_ptr_vector::double_ptr_vector(), dvar_matrix::dvar_matrix(), dvar_vector::dvar_vector(), dvector::dvector(), eigenvalues(), eigenvectors(), elem_div(), elem_prod(), evaluate_function(), expm(), extract_diagonal(), fill(), dvector::fill(), findValFromFile(), first_difference(), fmm::fmin(), fmmt1::fmin(), fmmt1::fmin2(), dfpool::free(), adpool::free(), funnel_gradcalc(), funnel_init_df1b2variable::funnel_init_df1b2variable(), DF_FILE::fwrite(), gammp(), gauss_hermite(), gauss_hermite_stuff::gauss_hermite_stuff(), gauss_legendre(), gcf(), laplace_approximation_calculator::generate_antithetical_rvs(), function_minimizer::get_bigS(), quadratic_prior::get_cgradient(), quadratic_prior::get_cHessian(), quadratic_prior::get_cHessian_contribution(), quadratic_prior::get_cHessian_from_vHessian(), laplace_approximation_calculator::get_complete_hessian(), get_confidence_interval(), get_f1b2buffer_size(), laplace_approximation_calculator::get_hessian_components_banded_lme(), laplace_approximation_calculator::get_hessian_from_components_lme(), function_minimizer::get_hybrid_monte_carlo_value(), get_initial_u(), shareinfo::get_inv_matrix_shared(), shareinfo::get_inv_vector_shared(), get_inverse_sparse_hessian(), param_init_d3array::get_jacobian(), df1b2quadratic_prior::get_Lxu(), laplace_approximation_calculator::get_newton_raphson_info(), get_option_number(), function_minimizer::get_particular_grad(), get_second_derivative(), get_second_ders(), laplace_approximation_calculator::get_uhat_lm_newton(), laplace_approximation_calculator::get_uhat_lm_newton2(), laplace_approximation_calculator::get_uhat_quasi_newton(), laplace_approximation_calculator::get_uhat_quasi_newton_block_diagonal(), quadratic_prior::get_vHessian(), ghk_test(), grad_chk(), grad_stack::grad_stack(), gradcalc(), gradient_structure::gradient_structure(), gradnew(), dfpool::grow(), adpool::grow(), gser(), hess_calcreport(), function_minimizer::hess_determinant(), hess_errorreport(), function_minimizer::hess_inv(), function_minimizer::hess_routine(), function_minimizer::hess_routine_and_constraint(), function_minimizer::hess_routine_noparallel_random_effects(), function_minimizer::hess_routine_random_effects(), function_minimizer::hybrid_mcmc_routine(), i3_array::i3_array(), imtqlx(), df1b2variable::increment_adpool_counter(), init_df1_one_variable::init_df1_one_variable(), init_df1_three_variable::init_df1_three_variable(), init_df1_two_variable::init_df1_two_variable(), init_df3_three_variable::init_df3_three_variable(), init_df3_two_variable::init_df3_two_variable(), dvar_vector::initialize(), dvar_matrix::initialize(), inv_cumd_beta_stable(), inv_cumd_gamma(), inv_cumd_norm_inner(), inv_cumd_norm_ln(), inv_cumd_norm_logistic(), ivector::ivector(), gradient_structure::jacobcalc(), laplace_approximation_calculator::laplace_approximation_calculator(), function_minimizer::likeprof_routine(), function_minimizer::limited_memory_quasi_newton(), function_minimizer::limited_memory_quasi_newton_block(), laplace_approximation_calculator::lincg(), ln_det(), ln_det_choleski(), ln_det_choleski_error(), ln_normal_tail_left(), ln_normal_tail_right(), laplace_approximation_calculator::local_minimization(), log_comb(), log_density_negbinomial(), log_negbinomial_density(), lower_triangular_choleski_decomp_positive(), lower_triangular_solve(), lower_triangular_solve_trans(), MAT(), function_minimizer::mcmc_computations(), function_minimizer::mcmc_eval(), function_minimizer::mcmc_routine(), memcpy(), mfexp(), function_minimizer::minimize(), function_minimizer::monte_carlo_routine(), multifan(), negbinomial_density(), new_probing_bounded_multivariate_normal(), nograd_assign_column(), nograd_assign_row(), function_minimizer::normalize_posterior_distribution(), nr_generic(), null_ptr_err_message(), double_index_guts::operator double(), index_guts::operator int(), vector_shape::operator new(), arr_link::operator new(), adstring_array::operator()(), vcubic_spline_function_array::operator()(), laplace_approximation_calculator::operator()(), df1b2function_tweaker::operator()(), dvar_vector_position::operator()(), dvar_matrix_position::operator()(), dmatrix_position::operator()(), operator*(), operator+(), ivector::operator+=(), test_smartlist::operator+=(), fixed_smartlist::operator+=(), fixed_smartlist2::operator+=(), df1b2matrix::operator+=(), operator-(), fixed_smartlist::operator--(), fixed_smartlist2::operator--(), test_smartlist::operator-=(), fixed_smartlist::operator-=(), fixed_smartlist2::operator-=(), df1b2matrix::operator-=(), operator<<(), imatrix::operator=(), funnel_dependent_df1b2variable::operator=(), ivector::operator=(), df1b2vector::operator=(), df1b2matrix::operator=(), quadratic_prior::operator=(), df1b2quadratic_prior::operator=(), d4_array::operator=(), dvar4_array::operator=(), d5_array::operator=(), dvar5_array::operator=(), d6_array::operator=(), dvar6_array::operator=(), d7_array::operator=(), dvar7_array::operator=(), banded_symmetric_dmatrix::operator=(), banded_lower_triangular_dmatrix::operator=(), operator>>(), adstring_array::operator[](), orthpoly_constant_begin(), orthpoly_constant_begin_end(), pad(), padp(), pads(), padsum(), parse_dll_options(), polint(), pow(), print_derivatives(), print_hist_data(), print_is_diagnostics(), print_values(), function_minimizer::prof_minimize_re(), function_minimizer::projected_hess_determinant(), function_minimizer::pvm_master_mcmc_computations(), param_init_d3array::pvm_pack(), function_minimizer::pvm_slave_likeprof_routine(), param_init_d3array::pvm_unpack(), function_minimizer::quasi_newton_block(), randnegbinomial(), function_minimizer::random_effects_maximization(), test_smartlist::read_buffer(), fixed_smartlist::read_buffer(), fixed_smartlist2::read_buffer(), DF_FILE::read_cmpdif_stack_buffer(), read_covariance_matrix(), read_empirical_covariance_matrix(), fixed_smartlist::read_file(), fixed_smartlist2::read_file(), read_hessian_matrix_and_scale(), read_hessian_matrix_and_scale1(), read_hist_data(), read_old_scale(), read_pass1_eq_1(), read_pass1_eq_3(), read_pass2_1(), read_pass2_1_dvdv(), read_pass2_1_dvdvdv(), read_pass2_2(), read_pass2_2_dvdv(), read_pass2_2_dvdvdv(), report_calling_set(), report_confidence_limits(), report_gradstack_flag(), report_gradstack_flag2(), report_onesided_confidence_limits(), adlist_ptr::resize(), dfsdmat::restore(), df1b2variable::restore_adpool_pointer(), initial_df1b2params::restore_varsptr(), test_smartlist::rewind(), fixed_smartlist::rewind(), fixed_smartlist2::rewind(), ivector::safe_allocate(), dvector::safe_allocate(), dvector::safe_deallocate(), ivector::safe_deallocate(), initial_params::save(), dfsdmat::save(), df1b2variable::save_adpool_pointer(), initial_params::save_all(), gradient_structure::save_arrays(), gradient_structure::save_dependent_variable_position(), dmatrix::save_dmatrix_derivatives(), save_dmatrix_derivatives(), banded_symmetric_dmatrix::save_dmatrix_derivatives(), banded_lower_triangular_dmatrix::save_dmatrix_derivatives(), dmatrix::save_dmatrix_derivatives_na(), dvector::save_dvector_derivatives(), dvector::save_dvector_derivatives_na(), save_number_of_local_effects(), param_init_vector::save_value(), param_init_bounded_vector::save_value(), param_init_number::save_value(), param_init_matrix::save_value(), param_init_d3array::save_value(), gradient_structure::save_variables(), initial_df1b2params::save_varsptr(), function_minimizer::sd_routine(), seldif_basis(), gradient_structure::set_CMPDIF_BUFFER_SIZE(), grad_stack::set_gradient_stack(), gradient_structure::set_GRADSTACK_BUFFER_BYTES(), gradient_structure::set_GRADSTACK_BUFFER_SIZE(), gradient_structure::set_NUM_DEPENDENT_VARIABLES(), param_init_vector_vector::set_scalefactor(), param_init_bounded_vector_vector::set_scalefactor(), param_init_matrix_vector::set_scalefactor(), param_init_bounded_matrix_vector::set_scalefactor(), param_init_number_vector::set_scalefactor(), param_init_bounded_number_vector::set_scalefactor(), dfpool::set_size(), likeprof_params::set_stepnumber(), likeprof_params::set_stepsize(), funnel_init_df1b2variable::set_value(), funnel_init_bounded_df1b2vector::set_value(), funnel_init_df1b2vector::set_value(), funnel_init_df1b2matrix::set_value(), init_df1b2vector::set_value(), param_init_vector::set_value_inv(), set_value_inv_partial(), set_value_partial(), initial_params::setshare(), param_init_vector::setshare(), param_init_matrix::setshare(), param_init_d3array::setshare(), dvector::shallow_copy(), dmatrix::shallow_copy(), d3_array::shallow_copy(), initial_params::shared_set_value(), initial_params::shared_set_value_inv(), initial_params::shared_size_count(), singval_decomp(), smartlist::smartlist(), Sn(), safe_choleski_solver::solve(), solve(), solve_trans(), string_parser::string_parser(), laplace_approximation_calculator::test_trust_region_method(), tmpxchol1(), tracing_message(), nested_calls_shape::trim(), function_minimizer::trust_region_update(), function_minimizer::unrestricted_hess_determinant(), function_minimizer::user_d2frandeff(), function_minimizer::user_dfrandeff(), function_minimizer::user_randeff(), vector2matrix(), vector_range_exception::vector_range_exception(), verify_identifier_string(), test_smartlist::write(), fixed_smartlist::write(), fixed_smartlist2::write(), test_smartlist::write_buffer(), fixed_smartlist::write_buffer(), fixed_smartlist2::write_buffer(), fixed_smartlist::write_buffer_one_less(), fixed_smartlist2::write_buffer_one_less(), DF_FILE::write_cmpdif_stack_buffer(), write_empirical_covariance_matrix(), grad_stack::write_grad_stack_buffer(), dvar_matrix::write_on(), dmatrix::write_on(), df1b2_gradlist::write_pass1_minus(), df1b2_gradlist::write_pass1_minuscv(), df1b2_gradlist::write_pass1_minusvc(), df1b2_gradlist::write_pass1_prod(), df1b2_gradlist::write_pass1_sum(), fmm_control::writeon(), funnel_init_df1b2variable::xinit(), funnel_init_bounded_df1b2vector::xinit(), funnel_init_df1b2vector::xinit(), funnel_init_df1b2matrix::xinit(), xxxv(), d3_array::~d3_array(), DF_FILE::~DF_FILE(), double_index_type::~double_index_type(), dvar3_array::~dvar3_array(), fixed_smartlist::~fixed_smartlist(), fixed_smartlist2::~fixed_smartlist2(), grad_stack::~grad_stack(), index_type::~index_type(), init_df3_three_variable::~init_df3_three_variable(), and test_smartlist::~test_smartlist().