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root / branches / parallel

  • svn:mergeinfo: /branches/admb-11:488-542 /trunk:264-433,435-546
# Date Author Comment
554 07/29/2012 09:24 am Derek Seiple

Added parallel-diff.txt. It shows what code has been changed during development.

553 07/22/2012 07:41 am Derek Seiple

Put all mpi examples in admb-mpi examples folder

552 07/22/2012 07:35 am Derek Seiple

Put all mpi examples in admb-mpi examples folder

551 07/20/2012 11:55 am Derek Seiple

Fix build errors

550 07/20/2012 10:04 am Derek Seiple

Fix build error introduced in last commit

547 07/19/2012 08:43 am Derek Seiple

merge trunk to branch -r 434:546

487 06/12/2012 08:24 am Derek Seiple

Parallelization effort

473 05/22/2012 09:18 am Derek Seiple

Parallelization work and other code improvements

451 05/14/2012 03:01 pm Derek Seiple

parallelization of inner_optimization_banded function and sepbounds bug fix

448 05/09/2012 10:54 am Derek Seiple

Latest work

445 05/03/2012 01:10 pm Derek Seiple

reorganize block diagonal examples

444 05/01/2012 08:04 am Derek Seiple

accidently commited debug code

443 05/01/2012 08:03 am Derek Seiple

improved sync flag and temporary changes to ad_separable_manager

442 05/01/2012 07:40 am Derek Seiple

move block diagonal example

440 04/30/2012 07:27 am Derek Seiple

MPI example for block diagonal

438 04/27/2012 08:04 am Derek Seiple

Fixed MPI compile error

435 04/26/2012 12:17 pm Derek Seiple

Fix error from merge

434 04/26/2012 10:08 am Derek Seiple

merge of trunk to branch revisions 263:433

429 04/24/2012 12:40 pm Derek Seiple

mpi test program

268 03/02/2012 01:02 pm Derek Seiple

Re-add adlink and adcomp with correct permissions.

267 03/02/2012 01:00 pm Derek Seiple

Remove adcomp and adlink. Will re-add them with correct permissions.

266 03/01/2012 09:44 am Derek Seiple

fix build for Open MPI

264 03/01/2012 06:14 am Derek Seiple
263 02/29/2012 02:12 pm Derek Seiple

Merge from trunk -r 72:262 into branch

262 02/29/2012 11:10 am Derek Seiple

change to configure script, adcomp, adlink

261 02/29/2012 10:30 am Derek Seiple

configure change

260 02/29/2012 09:48 am Derek Seiple

configure change

258 02/29/2012 08:46 am Derek Seiple

configure change

257 02/29/2012 08:11 am Derek Seiple

configure change

256 02/29/2012 07:31 am Derek Seiple

configure change

255 02/29/2012 06:52 am Derek Seiple

Change to adlink, adcomp

254 02/29/2012 06:20 am Derek Seiple

Change to configure

253 02/29/2012 05:34 am Derek Seiple

Change to configure and make file to work with more OSes

252 02/28/2012 02:54 pm Johnoel Ancheta

Just to test branches on buildbot.

251 02/28/2012 02:49 pm Johnoel Ancheta

Just to test branches on buildbot.

236 01/25/2012 07:34 am Derek Seiple

Minor makefile chnage

235 01/25/2012 05:41 am Derek Seiple

Clean up

234 01/25/2012 05:41 am Derek Seiple

Clean up

233 01/24/2012 12:24 pm Derek Seiple

Configure changes. Small change so hessian comp for non-RE works.

232 01/23/2012 10:36 am Derek Seiple

Forgot to add two files.

231 01/23/2012 10:05 am Derek Seiple

Changes to configure to work with Open MPI.

226 01/12/2012 08:21 am dseiple

code clean up

198 11/18/2011 04:45 am dseiple

Fix nested4 for parallel.

197 11/17/2011 12:53 pm dseiple

Forgot Makefile

196 11/17/2011 12:51 pm dseiple

Added nested4 example.

195 11/17/2011 12:49 pm dseiple

Set output from master only.

194 11/15/2011 11:09 am dseiple
193 11/15/2011 11:08 am dseiple

RE Hessian and Covariance now correct. Output files now correct. Only minor changes to follow.

192 11/08/2011 12:05 pm dseiple

Improved separable model. RE now converges for multiple slaves.

191 11/03/2011 06:45 am dseiple

consolidated mpi examples

190 11/02/2011 11:03 am dseiple

Added another sparable example. Added code to coordinate convergance within get_uhat_quasi_newton_block_diagonal

189 11/01/2011 10:53 am dseiple
188 10/25/2011 09:13 am dseiple

slight change so hessian comp of non-RE models still works

187 10/25/2011 08:47 am dseiple

made changes to the hessian for RE. Fixes hessian complaint for 2 slaves. Still doesn't converge for 2 slaves.

186 10/21/2011 10:34 am dseiple

df1b2gradlist suffixes. non-RE gradient sync.

178 10/13/2011 06:44 am dseiple

Changed name of separable_bounds class to ad_separable_manager. Improved so the bounds are calculated only once through the life of the program.

175 10/10/2011 10:24 am dseiple

sycronized inner maxg amoung slaves and master. Slaves don't print inner maxg

174 10/10/2011 08:06 am dseiple

Improvement to handling new separable_bounds class

173 10/07/2011 08:33 am dseiple

First attempt at running separable model in parallel using Open MPI. Added test example in orange_mpi_test. Many changes to come.

93 07/19/2011 01:59 pm jsibert

added GNUMakefile(s)

88 07/14/2011 11:42 am jsibert

changes to mod_hess.cpp and model7.cpp

85 07/12/2011 06:36 pm jsibert

change 81 to 101 cmpdif_file_name in fvar.hpp

83 07/12/2011 01:54 pm jsibert

clean compile on Dave's patches; errors in adcomp and catage example

72 07/11/2011 02:46 pm johnoel

Sandbox parallel development.

70 07/09/2011 10:22 am johnoel

Update borland installer config.

69 07/08/2011 06:30 pm johnoel

Update vc build folder.

68 07/08/2011 04:15 pm johnoel

Fix borland 5.5 builds.

67 07/07/2011 01:28 pm johnoel

Be able to verify with different ADMB_HOME paths.

66 07/06/2011 04:35 pm johnoel

Add binary installation procedure for macos.

65 07/06/2011 03:14 pm johnoel

Really fix glmmadmb vc build.

64 07/06/2011 11:51 am johnoel

Add fix for glmmadmb vc build contributed by Ben Bolker.

63 07/06/2011 11:04 am johnoel

Update ADMB version control URL.

62 07/06/2011 09:18 am cgrandin

Add support for MinGW 5.2

61 07/05/2011 12:49 pm johnoel

Add glmmadmb to examples.

60 07/01/2011 05:52 pm johnoel

Workaround for Intel compiler, use safe code instead of opt for a few functions.

59 06/28/2011 07:01 pm johnoel

Update Intel build procedure and version number to 10.1.

58 06/28/2011 06:14 pm johnoel

Fix Intel build by adding another character type to adstring::operator+.

57 06/28/2011 06:01 am andersn

fixed small typo in README.txt

56 06/27/2011 04:39 pm johnoel

Add place for user contributed files.

55 06/26/2011 05:05 pm jsibert

added dox for dvariable and related classes

54 06/23/2011 08:04 pm arnima

Replace 'std dev' with 'std.dev' in manuals and examples

53 06/23/2011 08:00 pm arnima

Write out 'std.dev' instead of 'std dev' in *.cor and *.std files

52 06/23/2011 07:58 pm arnima

Define 'sumsq' as alias of 'norm2'

51 06/23/2011 05:19 pm casper

Added matrix exponential for df1b2matrix

50 06/23/2011 02:50 pm casper

dmatrix version of matrix exponential expm

49 06/23/2011 12:32 pm jsibert

fix PI compile error in cgamdev.cpp

48 06/23/2011 10:55 am mbrooks

documented negative binomial density functions

47 06/23/2011 10:46 am arnima

Replace 3.14159* with PI everywhere

46 06/23/2011 10:11 am arnima

Define PI (and M_PI) in fvar.hpp

45 06/23/2011 09:40 am jsibert

changes to Doxyfile and dox Makefile

44 06/22/2011 05:24 pm arnima

Fix warnings in tpl2cpp.lex and tpl2rem.lex

43 06/22/2011 04:51 pm dseiple

undo of revision 37

42 06/22/2011 03:23 pm arnima

Simplify and comment CXXFLAGS and LDFLAGS in adcomp, adlink, and admb

41 06/22/2011 01:01 pm johnoel

Remove old scripts.

40 06/22/2011 12:57 pm johnoel

Remove unused file.

39 06/22/2011 12:55 pm johnoel

Fix scripts to pass CXXFLAGS and LDFLAGS to adcomp and adlink.

38 06/22/2011 12:09 pm johnoel

Add missing step in README.txt.

37 06/22/2011 10:12 am dseiple

removed duplicate gammln function. prevariable version instead of dvariable version.

36 06/21/2011 04:51 pm johnoel

Don't force build hs_sparse.cpp.

35 06/21/2011 04:04 pm johnoel

Add Mollie Brooks suggestion for MacOS users.