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| Revision:

root / trunk / src / df1b2-separable @ 1162

# Date Author Comment
1162 08/16/2013 09:18 am Chris Grandin

Better integration of debugging library gdbprintlib into admb. The admb and admb.bat scripts now pass a debug flag to tpl2cpp.exe and tpl2rem.exe which insert the void function call to pad() in the main body of the CPP file. This allows the debugger to see the functions inside gdbprintlib and allows the user to use them inside a gdb session. CG

1136 08/05/2013 12:40 pm Johnoel Ancheta

Remove end of file blank lines.

1125 07/24/2013 07:07 pm Johnoel Ancheta

Opps, cygwin and mingw shells can build.

1124 07/24/2013 06:30 pm Johnoel Ancheta

Will build in cygwin shell.

1113 07/15/2013 11:50 am Johnoel Ancheta

Remove some unused variable warnings.

1112 07/12/2013 02:41 pm Johnoel Ancheta

Big change: remove end of line spaces.

1110 07/11/2013 06:11 pm Johnoel Ancheta

Remove end of line spaces.

1109 07/11/2013 05:22 pm Johnoel Ancheta

Remove more end of line spaces.

1107 07/11/2013 02:56 pm Johnoel Ancheta

Remove end of line spaces.

1086 06/26/2013 12:32 pm Johnoel Ancheta

Fix lex build under windows. Do not hard code the utitlities path.

1085 06/25/2013 06:36 pm Johnoel Ancheta
  • Fixed the admb batch scripts to build correctly.
  • Remove SHELL dependency in GNUmakefile.
1079 06/24/2013 11:46 am Johnoel Ancheta

Simplify main GNUmakefile build by eliminating sub-makes.

1070 06/21/2013 04:30 pm Johnoel Ancheta

[Issue #122] Simplified nmake build files. Does not call utilities\make in src\Makefile.

1064 06/18/2013 05:08 pm Johnoel Ancheta

[Issue #118] add shared target
$ make shared

1056 06/10/2013 05:56 pm Johnoel Ancheta

Don't do pvm stuff in lex files.

1028 05/30/2013 04:42 pm Johnoel Ancheta

Simplify build instructions for tpl2cpp from nh99/Makefile and tpl2rem from df1b2-separable/Makefile by moving to src/Makefile.

1025 05/29/2013 04:36 pm Johnoel Ancheta

See http://lists.admb-project.org/pipermail/users/2013-May/002337.html. Fournier contributed code.

1024 05/29/2013 11:43 am Chris Grandin

tpl2cpp.exe and tpl2rem.exe are now moved properly into build/dest/bin

1023 05/28/2013 02:24 pm Johnoel Ancheta

Force tpl2cpp and tpl2rem builds.

1022 05/24/2013 05:16 pm Johnoel Ancheta

Use memset to initialize array for faster run times.

951 04/11/2013 05:06 pm Johnoel Ancheta

Remove unused makefiles.

936 04/05/2013 06:00 pm Johnoel Ancheta

Modify build script to work with MinGW without msys.

907 04/02/2013 12:30 pm Johnoel Ancheta

Avoid output to tpl2cpp-winflex.c adn tpl2rem-winflex.c.

906 04/02/2013 12:22 pm Johnoel Ancheta

Use the gnuwin32 flex for windows.

905 04/01/2013 06:32 pm Johnoel Ancheta

Update lex .c files for those without flex.

900 03/29/2013 06:22 pm Johnoel Ancheta

Should initialize it.

897 03/29/2013 02:47 pm Johnoel Ancheta

Use Makeflags -j and do not parallel build tpl2rem and tpl2cpp.

885 03/28/2013 11:55 am Johnoel Ancheta

Reorg makefiles

879 03/23/2013 10:33 am Johnoel Ancheta

VC build improvements.

870 03/21/2013 06:25 pm Johnoel Ancheta

Update build files for VC

868 03/21/2013 02:25 pm Johnoel Ancheta

Fix bug, http://lists.admb-project.org/pipermail/developers/2013-March/000755.html

851 03/15/2013 11:42 am Johnoel Ancheta

Fix build when flex is missing.

http://lists.admb-project.org/pipermail/users/2013-March/002256.html

Also, other build file cleanups.

818 03/12/2013 04:07 pm Johnoel Ancheta

Major changes to the gmake build files to simplify and improve.
To use just type

$ make

Or for Visual C++

$ nmake

in the main source directory.

784 03/05/2013 01:47 pm Johnoel Ancheta

Fix cl paths.

753 02/14/2013 04:13 pm Hans Skaug

Add a few overloaded pow() functions. Remove f1b2vc10.cpp which contained duplicated files

751 02/13/2013 01:52 pm Hans Skaug

Documentation of Laplace approximation for block diagonal case

747 02/06/2013 04:22 pm Hans Skaug

Add scale_factor for random effects model. Code from Dave

733 12/17/2012 02:08 pm Chris Grandin

The tpl2rem.lex lexer now adds #include <contrib.h> to user built CPP files.

644 10/24/2012 03:00 pm Johnoel Ancheta

Revert to previous.

643 10/24/2012 01:43 pm Mollie Brooks

documented VEC and MAT in dmat29.cpp and fvar_m43.cpp

602 09/05/2012 03:09 pm Johnoel Ancheta

[Issue #106] Revert ludcmp back to ADMB-9 source.

601 09/04/2012 03:36 pm Johnoel Ancheta

[Issue #108] Reverted beta and gamma to ADMB-9 code.

548 07/19/2012 01:36 pm Johnoel Ancheta

Initialize ld.

542 07/10/2012 02:04 pm Johnoel Ancheta

Copy VERSION .

481 06/07/2012 06:28 pm Johnoel Ancheta

[Issue #99] Begin support of x86_64-w64-mingw-g++.

467 05/18/2012 02:33 pm Ian Taylor

fix proposed by Chris Gast for issue #37 with mismatch in ln_det

462 05/16/2012 01:24 pm Johnoel Ancheta

Move sed.exe to utilities.

446 05/03/2012 05:22 pm Johnoel Ancheta

[Issue #51] using const instead of _CONST macro in headers.

441 04/30/2012 06:29 pm Johnoel Ancheta

using const instead of _CONST in linad99 and df1b2-separable.

422 04/12/2012 04:02 pm Johnoel Ancheta

Revert src back to r413 keeping changes in r420.

419 04/10/2012 07:01 pm Arni Magnusson

Replace Unicode characters with ASCII

418 04/10/2012 04:36 pm Arni Magnusson

Revert r414 conversion of URLs, from http:// url back to http://url

417 04/10/2012 04:27 pm Arni Magnusson

Reverted conversion of line endings from r414, back to Linux style

414 04/10/2012 09:35 am Chris Grandin

Changed almost all CPP HPP and H files to reduce warnings from Ubuntu build involving whitespace in code. All assignment operators should now be surrounded by spaces, all comments should be preceded by a space, all for loop constructs should have whitespace surrounding all statements.

391 04/02/2012 03:54 pm Johnoel Ancheta

Fix solaris studio build for istringstream.

387 04/02/2012 12:57 am Johnoel Ancheta

Removed no-deprecated and permissive flags, then changed deprecated headers with recommended.

381 03/30/2012 12:03 pm Johnoel Ancheta

Remove meaningless const warning from intel compiler.

378 03/29/2012 11:55 pm Johnoel Ancheta

[Issue #97] Should also set CFLAGS for 32 bit builds.

364 03/26/2012 01:44 am Johnoel Ancheta

Fix warnings about unused variables.

354 03/21/2012 11:01 pm Arni Magnusson

Use 'rd' instead of 'rmdir' in Windows makefiles (don't use coreutils)

353 03/21/2012 10:05 pm Arni Magnusson

Don't copy sedflex to 'bin' directory

351 03/21/2012 08:35 pm Arni Magnusson

Remove sedcmd* files, not used anywhere

348 03/21/2012 04:07 pm Johnoel Ancheta

[Issue #53] Ported with clang compiler.

345 03/21/2012 10:00 am Arni Magnusson

Remove sed1.exe

344 03/21/2012 09:02 am Arni Magnusson

Fix whitespace etc in makefiles

341 03/18/2012 03:40 pm Arni Magnusson

Fix whitespace etc in MinGW makefile tree

327 03/16/2012 06:46 pm Mollie Brooks

+3 vectorized versions of pow function, need to remove from contrib/

316 03/16/2012 01:28 pm Arni Magnusson

Upgrade sed.exe from version 2.05 to 3.02

303 03/15/2012 06:31 pm Mollie Brooks

sum log det instead of product of det to check invertibility

301 03/15/2012 06:02 pm Weihai Liu

add prior_section and likelihood_section

289 03/13/2012 07:23 pm Johnoel Ancheta

Really put svn:keyword Id...

287 03/13/2012 07:07 pm Johnoel Ancheta

Add svn 'Id'.

246 02/03/2012 12:06 pm Johnoel Ancheta

[Bug #22] Use Hugo Mildenbergers fixes that removed warnings.

217 01/04/2012 07:32 am skaug

Changes to df1b2fnl.cpp xmodelm3.cpp needed for new robust glmmadmb.tpl

185 10/14/2011 05:29 pm johnoel

Fix Bug#11 tpl2rem should work with CR+LF line endings.

169 10/04/2011 02:15 pm dseiple

More fixes for betai and incbet. 3 examples added to test folder.

148 09/22/2011 03:40 pm johnoel

Revert to 127

128 08/15/2011 06:24 am liuweih

add PRIORS_SECTION, LIKELIHOODS_SECTION for regular admb and admb RE, also add current_feval() for Mollie's request Feature#10

127 08/12/2011 06:06 pm johnoel

Fix union, logistic and caest examples for the macos-32bit.

109 07/29/2011 06:42 pm johnoel

Opps...Fix broken builds from previous commit. Forgot to include header.

108 07/29/2011 04:07 pm johnoel

Fix union example segmentation problem.

104 07/28/2011 05:41 am liuweih

add two new files created by Dave for df1b2variable - double and its reverse form

89 07/14/2011 03:50 pm stevenmartell

duplicate declaration of "double lgam(double x)" in df13tester.cpp and in cgamdev.cpp. Commented out lines 942-1049 in df13tester.cpp

86 07/13/2011 10:43 am dseiple

Fix for lgam bug on the mac os. Removed duplicate symboles and consolidated to df11fun.* files. Removed df1fun.* files. Removed copy commands from the makefiles.

57 06/28/2011 06:01 am andersn

fixed small typo in README.txt

53 06/23/2011 08:00 pm arnima

Write out 'std.dev' instead of 'std dev' in *.cor and *.std files

52 06/23/2011 07:58 pm arnima

Define 'sumsq' as alias of 'norm2'

51 06/23/2011 05:19 pm casper

Added matrix exponential for df1b2matrix

48 06/23/2011 10:55 am mbrooks

documented negative binomial density functions

47 06/23/2011 10:46 am arnima

Replace 3.14159* with PI everywhere

44 06/22/2011 05:24 pm arnima

Fix warnings in tpl2cpp.lex and tpl2rem.lex

40 06/22/2011 12:57 pm johnoel

Remove unused file.

30 06/21/2011 01:49 pm johnoel

Fix the flex builds.

15 06/01/2011 01:47 pm andersn

added init_table to the random effects also

14 06/01/2011 11:40 am andersn

small adjustment to init_table

13 05/31/2011 12:45 pm andersn

Code from Dave stabilizing the random effects somewhat

9 04/25/2011 05:55 pm dseiple

Fixed control C problem. Now reads pfmc1[i]->use_control_c=0;

8 04/19/2011 10:28 pm skaug

From Dave: code for crtl-C to work in separable mode

7 04/18/2011 11:07 pm johnoel

Include tpl2rem and tpl2cpp targets in autoconf generated GNUmakefile.

1 04/08/2011 10:27 pm johnoel

Copied revision 1006 from shibi to nceas. Old version control will now be only read only. This will be the primary version control.