added dox to cifstream files
fix subversion Id property in tpl2cpp_output
The tpl2rem.lex lexer now adds #include <contrib.h> to user built CPP files.
Changed the lexer so that it adds #include <contrib.h> to a model's built cpp file. The user no longer needs to #include any of the contributed library header files in their TPL source.
Changes to the tpl2cpp output docs. Added \ingroup and more comments
Add tests target to mingw.
Added geolocation test for buildbot.
Add functions and classes in output from tpl2cpp. Only for Doxygen purposes, not libraries
Yet one more.
Opps forgot -std=c++11
Some don't like -std=c++11
Remove unused line.
Fix compiler problems.
correct typo in Doxyfile
removed Namspaces tab from dox; added source directory dox commands to mainpage.txt
Do only for c++11 compiler.
Add test-cov_re back with fixes for windows.
Add some code for c++11 threading.
modify simple example to agree with AUTODIF manual; added debug target to Makefile
Added unit tests.
Fix admb script. First file is the executable name.
Added unit testing for threaded.
added dox for prvariable class
added dox to fvar_fn1.cpp fvar_opr.cpp fvar_fn.cpp fvar.hpp
Add .cc to list of accepted files to admb script.
Use -pthread in linking.
Separating data types into files.
Fix broken build. Trim variable.
Build should fail at first error.
Clean out object files.
Use admb scripts instead of mygcco2.
Clean up output from flex.
vectorized versions of dbinom in statsLib (request from Bolker)
Reparameterization of the negative binomial in contrib/statsLib/dnbinom.cpp
Initial merge from davef.
For merging davef and trunk.
Re-Include geolocation tests.
Fix configure script, svnversion now outputs 'Unversioned directory' for non subversion folder.
Added programs that canbe used to verify the integrity of the covariance matrix stuff.
Another correction of sign in the covariance calculations
[ADMB Users] difference between ADMB-RE and R/mgcv in SEs ....
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