Revision:

Revisions

# Date Author Comment
97 07/24/2011 02:25 pm cgrandin

This update includes priorslib library code and makefile changes to implement PRIORS_SECTION.

96 07/24/2011 09:56 am mbrooks

added ecolib, including templates and tests

95 07/24/2011 09:29 am cgrandin

Lexer now scans PRIORS_SECTION and LIKELIHOOD_SECTION and allows C++ code in both. It also prepends 'prior_' or 'like_' to the function names after the 'disributed as' operator ~ for the respective sections. The functions will be included in the contrib directory as libraries which will be wrappers for the statslib library which is also in the contrib directory. The makefiles will be modified to link to these libraries. CG & WL

94 07/19/2011 02:34 pm jsibert

changes to dox for Weihai

93 07/19/2011 01:59 pm jsibert

added GNUMakefile(s)

92 07/18/2011 05:55 pm cgrandin

Scanner prior name (prior_name) and definition (prior_def) regular expressions now allow for whitespace around the tilde. Also a prior on a function call can now be defined, i.e. log(q) ~ dnorm(0,1). Also some changes by Weihai: "Most updates are in the define_prior, it allow users having any spaces around ~, and around their argument lists, I also setup the distribution mirror link there, not sure if that is the right way to go, which also need another user defined function see trim() at the end of file. See my attached rat example, which based on Mark's example converting winbugs to admb, first model on winbugs examples....

91 07/14/2011 04:26 pm stevenmartell

Update to Doxyfile with help info for contrib/statslib

90 07/14/2011 04:10 pm stevenmartell

Contributed libraries from Steve Martell --directory contrib/statslib

89 07/14/2011 03:50 pm stevenmartell

duplicate declaration of "double lgam(double x)" in df13tester.cpp and in cgamdev.cpp. Commented out lines 942-1049 in df13tester.cpp

88 07/14/2011 11:42 am jsibert

changes to mod_hess.cpp and model7.cpp

87 07/13/2011 01:32 pm dseiple

Removed duplicate double lgam(double) function from df13incbet.cpp

86 07/13/2011 10:43 am dseiple

Fix for lgam bug on the mac os. Removed duplicate symboles and consolidated to df11fun.* files. Removed df1fun.* files. Removed copy commands from the makefiles.

85 07/12/2011 06:36 pm jsibert

change 81 to 101 cmpdif_file_name in fvar.hpp

84 07/12/2011 05:58 pm jsibert

added contributed libraries to modules; streamlined INPUT section of Doxygile

83 07/12/2011 01:54 pm jsibert

clean compile on Dave's patches; errors in adcomp and catage example

82 07/12/2011 12:48 pm johnoel

Move glmmADMB folder because it conflicts with admb script.

81 07/12/2011 01:06 am cgrandin

Started adding library functions for PRIORS_SECTION. Also set up distribution library build objects for each platform. Added an example in the examples folder called simple-priors.

80 07/11/2011 07:35 pm cgrandin
79 07/11/2011 07:28 pm cgrandin

clean script for use while developing

78 07/11/2011 07:27 pm cgrandin

Remove hard coded paths

77 07/11/2011 05:42 pm cgrandin
76 07/11/2011 05:29 pm cgrandin
75 07/11/2011 03:48 pm johnoel

Sandbox GPU development.

74 07/11/2011 03:40 pm cgrandin

PRIORS_SECTION implementation. Lexer only at this point.

73 07/11/2011 02:58 pm johnoel

Add support for Oracle Solaris Studio 12.

72 07/11/2011 02:46 pm johnoel

Sandbox parallel development.

71 07/11/2011 02:45 pm johnoel

Sandbox priors development.

70 07/09/2011 10:22 am johnoel

Update borland installer config.

69 07/08/2011 06:30 pm johnoel

Update vc build folder.

68 07/08/2011 04:15 pm johnoel

Fix borland 5.5 builds.

67 07/07/2011 01:28 pm johnoel

Be able to verify with different ADMB_HOME paths.

66 07/06/2011 04:35 pm johnoel

Add binary installation procedure for macos.

65 07/06/2011 03:14 pm johnoel

Really fix glmmadmb vc build.

64 07/06/2011 11:51 am johnoel

Add fix for glmmadmb vc build contributed by Ben Bolker.

63 07/06/2011 11:04 am johnoel

Update ADMB version control URL.

62 07/06/2011 09:18 am cgrandin

Add support for MinGW 5.2

61 07/05/2011 12:49 pm johnoel

Add glmmadmb to examples.

60 07/01/2011 05:52 pm johnoel

Workaround for Intel compiler, use safe code instead of opt for a few functions.

59 06/28/2011 07:01 pm johnoel

Update Intel build procedure and version number to 10.1.

58 06/28/2011 06:14 pm johnoel

Fix Intel build by adding another character type to adstring::operator+.

57 06/28/2011 06:01 am andersn

fixed small typo in README.txt

56 06/27/2011 04:39 pm johnoel

Add place for user contributed files.

55 06/26/2011 05:05 pm jsibert

added dox for dvariable and related classes

54 06/23/2011 08:04 pm arnima

Replace 'std dev' with 'std.dev' in manuals and examples

53 06/23/2011 08:00 pm arnima

Write out 'std.dev' instead of 'std dev' in *.cor and *.std files

52 06/23/2011 07:58 pm arnima

Define 'sumsq' as alias of 'norm2'

51 06/23/2011 05:19 pm casper

Added matrix exponential for df1b2matrix

50 06/23/2011 02:50 pm casper

dmatrix version of matrix exponential expm

49 06/23/2011 12:32 pm jsibert

fix PI compile error in cgamdev.cpp

48 06/23/2011 10:55 am mbrooks

documented negative binomial density functions

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